Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4'-phosphopantetheinyl transferase family protein | HSERO_RS18555 | Not Available | Positive | 4256170 - 4256880 | 25671.8 |
| hypothetical protein | HSERO_RS18560 | Not Available | Positive | 4257011 - 4257769 | 27738.9 |
| methyl-accepting chemotaxis protein | HSERO_RS18565 | Not Available | Negative | 4257888 - 4259525 | 57658.2 |
| maleylacetate reductase | HSERO_RS18570 | Not Available | Negative | 4259830 - 4260900 | 37466.4 |
| intradiol ring-cleavage dioxygenase | HSERO_RS18575 | Not Available | Negative | 4260966 - 4261832 | 32657.5 |
| lysr family transcriptional regulator | HSERO_RS18580 | Not Available | Positive | 4261950 - 4262867 | 34428.4 |
| chalcone isomerase family protein | HSERO_RS18585 | Not Available | Positive | 4262979 - 4263560 | 21321.9 |
| mfs transporter | HSERO_RS18590 | Not Available | Positive | 4263557 - 4264801 | 43674.6 |
| cryptochrome/photolyase family protein | HSERO_RS18595 | Not Available | Positive | 4264798 - 4266357 | 60382.7 |
| response regulator | HSERO_RS18600 | Not Available | Positive | 4266593 - 4267228 | 22901.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


