Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s1 | HSERO_RS18410 | Not Available | Negative | 4222470 - 4224185 | 62304.3 |
| (d)cmp kinase | HSERO_RS18415 | Not Available | Negative | 4224404 - 4225072 | 24209.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | HSERO_RS18420 | Not Available | Negative | 4225131 - 4226462 | 48131.1 |
| prephenate dehydrogenase | HSERO_RS18425 | Not Available | Negative | 4226552 - 4227439 | 30959.2 |
| prephenate dehydratase | HSERO_RS18430 | Not Available | Negative | 4227479 - 4228552 | 39105.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | HSERO_RS18435 | Not Available | Negative | 4228689 - 4229801 | 40364.3 |
| dna gyrase subunit a | HSERO_RS18440 | Not Available | Negative | 4229862 - 4232507 | 97516.8 |
| outer membrane protein ompa | HSERO_RS18445 | Not Available | Positive | 4233226 - 4233837 | 21301.4 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | HSERO_RS18450 | Not Available | Positive | 4233983 - 4234708 | 26397.8 |
| had family hydrolase | HSERO_RS18455 | Not Available | Positive | 4234796 - 4235452 | 23545.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


