Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycii family protein | HSERO_RS18360 | Not Available | Negative | 4213258 - 4213560 | 11084.3 |
| ybab/ebfc family nucleoid-associated protein | HSERO_RS18365 | Not Available | Negative | 4213656 - 4213982 | 11544.2 |
| dna polymerase iii subunit gamma/tau | HSERO_RS18370 | Not Available | Negative | 4214043 - 4216181 | 75271.4 |
| sensor domain-containing diguanylate cyclase | HSERO_RS18375 | Not Available | Negative | 4216276 - 4217250 | 36121.0 |
| comea family dna-binding protein | HSERO_RS18380 | Not Available | Negative | 4217466 - 4217837 | 12897.6 |
| d-glycero-beta-d-manno-heptose-7-phosphate kinase | HSERO_RS18385 | Not Available | Negative | 4217968 - 4218939 | 35122.4 |
| udp-glucose dehydrogenase family protein | HSERO_RS18390 | Not Available | Negative | 4218902 - 4220281 | 50302.1 |
| lipopolysaccharide assembly protein lapb | HSERO_RS18395 | Not Available | Negative | 4220332 - 4221507 | 44346.2 |
| lapa family protein | HSERO_RS18400 | Not Available | Negative | 4221524 - 4221850 | 12307.4 |
| integration host factor subunit beta | HSERO_RS18405 | Not Available | Negative | 4222151 - 4222456 | 11385.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


