Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | HSERO_RS18260 | Not Available | Negative | 4190768 - 4191721 | 34265.1 |
| branched-chain amino acid abc transporter permease | HSERO_RS18265 | Not Available | Negative | 4191730 - 4192644 | 32289.1 |
| abc transporter substrate-binding protein | HSERO_RS18270 | Not Available | Negative | 4192657 - 4193835 | 41485.9 |
| anthranilate 1,2-dioxygenase ferredoxin subunit andab | HSERO_RS18275 | Not Available | Negative | 4193951 - 4195033 | 38461.6 |
| anthranilate 1,2-dioxygenase small subunit andad | HSERO_RS18280 | Not Available | Negative | 4195041 - 4195541 | 19420.9 |
| anthranilate 1,2-dioxygenase large subunit andac | HSERO_RS18285 | Not Available | Negative | 4195538 - 4196818 | 48474.4 |
| muconate/chloromuconate family cycloisomerase | HSERO_RS18290 | Not Available | Positive | 4197075 - 4198235 | 41520.0 |
| catechol 1,2-dioxygenase | HSERO_RS18295 | Not Available | Positive | 4198305 - 4199216 | 34087.3 |
| lysr family transcriptional regulator | HSERO_RS18300 | Not Available | Negative | 4199638 - 4200540 | 33678.2 |
| arac family transcriptional regulator | HSERO_RS18305 | Not Available | Positive | 4200968 - 4201990 | 37815.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


