Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus modification protein pilv | HSERO_RS18210 | Not Available | Positive | 4183489 - 4184001 | 17551.4 |
| pilw family protein | HSERO_RS18215 | Not Available | Positive | 4184001 - 4184885 | 31663.5 |
| pilus assembly protein | HSERO_RS18220 | Not Available | Positive | 4184882 - 4185487 | 21307.4 |
| type iv pilin protein | HSERO_RS18225 | Not Available | Positive | 4185490 - 4185972 | 17240.5 |
| gsph/fimt family pseudopilin | HSERO_RS18230 | Not Available | Positive | 4185953 - 4186450 | 18043.8 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | HSERO_RS18235 | Not Available | Positive | 4186531 - 4187652 | 40263.6 |
| riboflavin synthase | HSERO_RS18240 | Not Available | Positive | 4187700 - 4188320 | 21467.9 |
| alpha/beta hydrolase | HSERO_RS18245 | Not Available | Negative | 4188347 - 4189216 | 31196.5 |
| abc transporter atp-binding protein | HSERO_RS18250 | Not Available | Negative | 4189304 - 4190014 | 26100.7 |
| abc transporter atp-binding protein | HSERO_RS18255 | Not Available | Negative | 4190011 - 4190778 | 27074.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


