Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3861 domain-containing protein | HSERO_RS18115 | Not Available | Negative | 4162166 - 4162468 | 11354.7 |
| padr family transcriptional regulator | HSERO_RS18120 | Not Available | Negative | 4162520 - 4162960 | 16441.0 |
| hypothetical protein | HSERO_RS25250 | Not Available | Positive | 4162947 - 4163402 | 15944.8 |
| peroxidase-related enzyme | HSERO_RS18125 | Not Available | Positive | 4163430 - 4163996 | 21266.6 |
| nucleoside 2-deoxyribosyltransferase | HSERO_RS18130 | Not Available | Negative | 4164033 - 4164533 | 18333.8 |
| acyl-coa dehydrogenase | HSERO_RS18135 | Not Available | Negative | 4164595 - 4167069 | 89868.5 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | HSERO_RS18140 | Not Available | Positive | 4167290 - 4168166 | 32121.2 |
| mapeg family protein | HSERO_RS18145 | Not Available | Positive | 4168207 - 4168587 | 13958.1 |
| hypothetical protein | HSERO_RS18150 | Not Available | Positive | 4168602 - 4168886 | 10284.1 |
| mfs transporter | HSERO_RS18155 | Not Available | Positive | 4169190 - 4170455 | 45997.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


