Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd family phosphohydrolase | HSERO_RS01535 | Not Available | Positive | 336825 - 338483 | 61633.8 |
| membrane protein | HSERO_RS01540 | Not Available | Positive | 338589 - 340178 | 58344.4 |
| sulp family inorganic anion transporter | HSERO_RS01545 | Not Available | Positive | 340353 - 341837 | 52314.5 |
| duf1993 domain-containing protein | HSERO_RS01550 | Not Available | Negative | 341945 - 342448 | 18444.1 |
| efflux transporter outer membrane subunit | HSERO_RS01555 | Not Available | Negative | 342527 - 344041 | 54078.8 |
| efflux rnd transporter permease subunit | HSERO_RS01560 | Not Available | Negative | 344075 - 347290 | 115284.0 |
| efflux rnd transporter periplasmic adaptor subunit | HSERO_RS01565 | Not Available | Negative | 347390 - 348589 | 41667.6 |
| alpha/beta hydrolase | HSERO_RS01570 | Not Available | Negative | 348600 - 349463 | 30871.5 |
| lysr family transcriptional regulator | HSERO_RS01575 | Not Available | Positive | 349905 - 350918 | 38114.0 |
| arac family transcriptional regulator | HSERO_RS01580 | Not Available | Positive | 351218 - 352234 | 37713.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


