Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-binding glutamate synthase family protein | HSERO_RS18025 | Not Available | Positive | 4142829 - 4144424 | 58440.4 |
| sulfurtransferase tusa family protein | HSERO_RS18030 | Not Available | Negative | 4144537 - 4144773 | 8840.63 |
| nudix domain-containing protein | HSERO_RS18035 | Not Available | Negative | 4144934 - 4145488 | 20553.5 |
| alanine--trna ligase | HSERO_RS18040 | Not Available | Negative | 4145518 - 4148142 | 94332.2 |
| hypothetical protein | HSERO_RS18045 | Not Available | Negative | 4148461 - 4148676 | 7431.52 |
| glycerophosphodiester phosphodiesterase | HSERO_RS18050 | Not Available | Negative | 4148917 - 4149660 | 26933.2 |
| 2tm domain-containing protein | HSERO_RS24520 | Not Available | Positive | 4149833 - 4150111 | 10403.8 |
| sensor histidine kinase | HSERO_RS18055 | Not Available | Positive | 4150158 - 4151300 | 41284.6 |
| lytr/algr family response regulator transcription factor | HSERO_RS18060 | Not Available | Positive | 4151318 - 4152124 | 29998.4 |
| hypothetical protein | HSERO_RS25085 | Not Available | Negative | 4152136 - 4152276 | 5018.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


