Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | HSERO_RS25450 | Not Available | Positive | 4126834 - 4127049 | 7954.45 |
| translational gtpase typa | HSERO_RS17980 | Not Available | Negative | 4127884 - 4129725 | 68295.9 |
| trna pseudouridine(55) synthase trub | HSERO_RS17985 | Not Available | Negative | 4129881 - 4130858 | 35058.6 |
| 30s ribosome-binding factor rbfa | HSERO_RS17990 | Not Available | Negative | 4131016 - 4131408 | 14465.3 |
| translation initiation factor if-2 | HSERO_RS17995 | Not Available | Negative | 4131518 - 4134382 | 102270.0 |
| transcription termination factor nusa | HSERO_RS18000 | Not Available | Negative | 4134435 - 4135994 | 57924.9 |
| ribosome maturation factor rimp | HSERO_RS18005 | Not Available | Negative | 4135991 - 4136485 | 18526.1 |
| 23s rrna pseudouridine(2605) synthase rlub | HSERO_RS18010 | Not Available | Negative | 4136881 - 4138908 | 71394.5 |
| smc-scp complex subunit scpb | HSERO_RS18015 | Not Available | Negative | 4138895 - 4139959 | 38520.8 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | HSERO_RS18020 | Not Available | Negative | 4140369 - 4142534 | 81288.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


