Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | HSERO_RS17880 | Not Available | Positive | 4111075 - 4112058 | 34519.9 |
| pyridoxal phosphate-dependent aminotransferase | HSERO_RS17885 | Not Available | Negative | 4112186 - 4113367 | 43011.9 |
| transcription antitermination factor nusb | HSERO_RS17890 | Not Available | Negative | 4113484 - 4113954 | 17396.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | HSERO_RS17895 | Not Available | Negative | 4114072 - 4114557 | 17217.5 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | HSERO_RS17900 | Not Available | Negative | 4114615 - 4115736 | 40208.5 |
| trna dihydrouridine(20/20a) synthase dusa | HSERO_RS17905 | Not Available | Negative | 4115812 - 4116858 | 38606.5 |
| hypothetical protein | HSERO_RS17910 | Not Available | Positive | 4116904 - 4117302 | 15240.6 |
| winged helix-turn-helix transcriptional regulator | HSERO_RS25445 | Not Available | Positive | 4117341 - 4117946 | 23072.1 |
| aaa family atpase | HSERO_RS17920 | Not Available | Positive | 4118064 - 4118588 | 20026.1 |
| acetyltransferase | HSERO_RS17925 | Not Available | Positive | 4118594 - 4119043 | 16825.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


