Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pep-cterm sorting domain-containing protein | HSERO_RS17690 | Not Available | Negative | 4062164 - 4062766 | 21705.7 |
| methyl-accepting chemotaxis protein | HSERO_RS17695 | Not Available | Negative | 4063109 - 4065049 | 68911.6 |
| substrate-binding periplasmic protein | HSERO_RS17700 | Not Available | Negative | 4065370 - 4066167 | 29629.9 |
| eama family transporter rard | HSERO_RS17705 | Not Available | Positive | 4066423 - 4067316 | 32178.2 |
| sensor domain-containing diguanylate cyclase | HSERO_RS17710 | Not Available | Positive | 4067441 - 4069018 | 57640.9 |
| class 1 fructose-bisphosphatase | HSERO_RS17715 | Not Available | Negative | 4069035 - 4070036 | 36965.5 |
| aminopeptidase n | HSERO_RS17720 | Not Available | Negative | 4070096 - 4072792 | 100392.0 |
| duf4136 domain-containing protein | HSERO_RS17725 | Not Available | Positive | 4073104 - 4073757 | 24230.7 |
| abc transporter substrate-binding protein | HSERO_RS17730 | Not Available | Negative | 4073770 - 4074921 | 41250.6 |
| hypothetical protein | HSERO_RS25080 | Not Available | Negative | 4075097 - 4075267 | 6048.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


