Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virk/ybjx family protein | HSERO_RS17650 | Not Available | Positive | 4052260 - 4053387 | 41865.9 |
| flagellar filament capping protein flid | HSERO_RS17655 | Not Available | Positive | 4053407 - 4055449 | 69012.4 |
| flagellar hook protein flge | HSERO_RS17660 | Not Available | Positive | 4055493 - 4056755 | 43240.7 |
| hypothetical protein | HSERO_RS17665 | Not Available | Positive | 4056767 - 4057486 | 26772.0 |
| lysr substrate-binding domain-containing protein | HSERO_RS17670 | Not Available | Negative | 4057518 - 4058369 | 30863.1 |
| alpha/beta fold hydrolase | HSERO_RS17675 | Not Available | Positive | 4058463 - 4059323 | 30455.1 |
| hypothetical protein | HSERO_RS25075 | Not Available | Negative | 4059457 - 4059624 | 6478.64 |
| hypothetical protein | HSERO_RS25375 | Not Available | Negative | 4059919 - 4060041 | 4653.87 |
| iron-containing redox enzyme family protein | HSERO_RS17680 | Not Available | Negative | 4060162 - 4061571 | 52467.3 |
| duf3297 family protein | HSERO_RS17685 | Not Available | Positive | 4061772 - 4062020 | 9347.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


