Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | HSERO_RS01485 | Not Available | Negative | 319906 - 320748 | 30291.6 |
| chase2 domain-containing protein | HSERO_RS01490 | Not Available | Positive | 320928 - 323201 | 83175.8 |
| b12-binding domain-containing radical sam protein | HSERO_RS01495 | Not Available | Positive | 323802 - 325328 | 57429.8 |
| transketolase | HSERO_RS01500 | Not Available | Positive | 325445 - 326263 | 29561.5 |
| transketolase family protein | HSERO_RS01505 | Not Available | Positive | 326260 - 327225 | 35055.4 |
| nad-dependent epimerase/dehydratase family protein | HSERO_RS01510 | Not Available | Positive | 327281 - 328219 | 34843.2 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | HSERO_RS01515 | Not Available | Positive | 328830 - 330488 | 59251.9 |
| beta strand repeat-containing protein | HSERO_RS01520 | Not Available | Positive | 330490 - 334758 | 141403.0 |
| fecr family protein | HSERO_RS01525 | Not Available | Positive | 334781 - 335539 | 26094.6 |
| mbl fold metallo-hydrolase | HSERO_RS01530 | Not Available | Negative | 335634 - 336407 | 27950.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


