Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1302 domain-containing protein | HSERO_RS17605 | Not Available | Positive | 4036818 - 4038509 | 60049.7 |
| efflux rnd transporter permease subunit | HSERO_RS17610 | Not Available | Positive | 4038610 - 4040979 | 86367.3 |
| wd40/yvtn/bnr-like repeat-containing protein | HSERO_RS17615 | Not Available | Positive | 4040995 - 4041990 | 34303.4 |
| aldehyde dehydrogenase family protein | HSERO_RS17620 | Not Available | Negative | 4042199 - 4043629 | 50294.4 |
| primary-amine oxidase | HSERO_RS17625 | Not Available | Negative | 4043704 - 4045995 | 84540.5 |
| hypothetical protein | HSERO_RS25070 | Not Available | Positive | 4046496 - 4046660 | 6053.55 |
| hypothetical protein | HSERO_RS17630 | Not Available | Negative | 4046732 - 4047568 | 30009.3 |
| sigma-70 family rna polymerase sigma factor | HSERO_RS17635 | Not Available | Positive | 4048121 - 4048621 | 18601.5 |
| duf4880 domain-containing protein | HSERO_RS17640 | Not Available | Positive | 4048630 - 4049580 | 33845.5 |
| tonb-dependent siderophore receptor | HSERO_RS17645 | Not Available | Positive | 4049607 - 4052132 | 90355.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


