Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | HSERO_RS17555 | Not Available | Negative | 4024890 - 4025624 | 26842.8 |
| glutamate/aspartate abc transporter permease gltk | HSERO_RS17560 | Not Available | Negative | 4025621 - 4026304 | 25196.8 |
| amino acid abc transporter permease | HSERO_RS17565 | Not Available | Negative | 4026316 - 4027041 | 26463.3 |
| carboxymuconolactone decarboxylase family protein | HSERO_RS17570 | Not Available | Negative | 4027063 - 4027638 | 20934.3 |
| transporter substrate-binding domain-containing protein | HSERO_RS17575 | Not Available | Negative | 4027677 - 4028558 | 32375.1 |
| aspartate aminotransferase family protein | HSERO_RS17580 | Not Available | Negative | 4028632 - 4029954 | 47499.1 |
| murr/rpir family transcriptional regulator | HSERO_RS17585 | Not Available | Negative | 4030287 - 4031168 | 31828.3 |
| methyl-accepting chemotaxis protein | HSERO_RS25370 | Not Available | Negative | 4031425 - 4032999 | 56540.9 |
| helix-turn-helix domain-containing protein | HSERO_RS17595 | Not Available | Positive | 4033689 - 4034684 | 37099.2 |
| duf1329 domain-containing protein | HSERO_RS17600 | Not Available | Positive | 4035416 - 4036777 | 50440.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


