Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmc domain/ycao domain-containing protein | HSERO_RS17505 | Not Available | Positive | 4014484 - 4016694 | 82229.2 |
| response regulator | HSERO_RS17510 | Not Available | Positive | 4016942 - 4017319 | 13539.4 |
| sensor histidine kinase | HSERO_RS17515 | Not Available | Positive | 4017468 - 4018673 | 43756.8 |
| gin domain-containing protein | HSERO_RS17520 | Not Available | Negative | 4018726 - 4019565 | 30900.7 |
| padr family transcriptional regulator | HSERO_RS17525 | Not Available | Negative | 4019558 - 4019875 | 11670.9 |
| murr/rpir family transcriptional regulator | HSERO_RS17530 | Not Available | Negative | 4020266 - 4021225 | 34382.2 |
| c45 family autoproteolytic acyltransferase/hydolase | HSERO_RS24495 | Not Available | Negative | 4021197 - 4022249 | 38562.8 |
| glutamine abc transporter atp-binding protein glnq | HSERO_RS17540 | Not Available | Negative | 4022239 - 4023009 | 28025.0 |
| glutamine abc transporter permease glnp | HSERO_RS17545 | Not Available | Negative | 4023006 - 4023662 | 23427.7 |
| glutamine abc transporter substrate-binding protein glnh | HSERO_RS17550 | Not Available | Negative | 4023693 - 4024442 | 27000.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


