Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2750 domain-containing protein | HSERO_RS25440 | Not Available | Negative | 3995520 - 3995876 | 12698.0 |
| toxin-antitoxin system ywqk family antitoxin | HSERO_RS24480 | Not Available | Negative | 3996632 - 3996919 | 11162.6 |
| hypothetical protein | HSERO_RS25235 | Not Available | Negative | 3997673 - 3997966 | 10648.8 |
| methyl-accepting chemotaxis protein | HSERO_RS17425 | Not Available | Positive | 3998725 - 4000353 | 57624.7 |
| hypothetical protein | HSERO_RS24900 | Not Available | Positive | 4000539 - 4000886 | 12944.7 |
| lysr family transcriptional regulator | HSERO_RS17430 | Not Available | Negative | 4000954 - 4001847 | 32303.2 |
| nad-dependent epimerase/dehydratase family protein | HSERO_RS17435 | Not Available | Positive | 4001956 - 4002888 | 33585.1 |
| hypothetical protein | HSERO_RS17440 | Not Available | Positive | 4003083 - 4003766 | 23752.8 |
| hypothetical protein | HSERO_RS17445 | Not Available | Negative | 4004041 - 4004694 | 23961.0 |
| immunity 50 family protein | HSERO_RS24490 | Not Available | Negative | 4005152 - 4005592 | 16177.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


