Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | HSERO_RS17345 | Not Available | Negative | 3979410 - 3979922 | 19633.8 |
| branched-chain amino acid abc transporter substrate-binding protein | HSERO_RS17350 | Not Available | Positive | 3980128 - 3981270 | 39217.1 |
| hypothetical protein | HSERO_RS17355 | Not Available | Negative | 3981411 - 3981737 | 11896.0 |
| hypothetical protein | HSERO_RS17360 | Not Available | Positive | 3982021 - 3982515 | 17652.6 |
| Trna-thr | Not Available | Not Available | Positive | 3982644 - 3982719 | Not Available |
| sos mutagenesis and repair protein | HSERO_RS17370 | Not Available | Negative | 3982874 - 3983362 | 18037.9 |
| lexa family protein | HSERO_RS17375 | Not Available | Negative | 3983359 - 3983784 | 15325.6 |
| hypothetical protein | HSERO_RS24865 | Not Available | Negative | 3984152 - 3984334 | 6638.95 |
| hypothetical protein | HSERO_RS24870 | Not Available | Negative | 3984394 - 3986088 | 62651.0 |
| s8 family anti-phage peptidase ites | HSERO_RS17380 | Not Available | Negative | 3986292 - 3988622 | 85441.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


