Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | HSERO_RS17295 | Not Available | Positive | 3963142 - 3964068 | 33151.5 |
| dctp deaminase | HSERO_RS17300 | Not Available | Negative | 3964171 - 3964740 | 21180.1 |
| enhanced serine sensitivity protein sseb c-terminal domain-containing protein | HSERO_RS17305 | Not Available | Negative | 3964864 - 3965658 | 28933.8 |
| hypothetical protein | HSERO_RS17310 | Not Available | Positive | 3965765 - 3967255 | 54785.2 |
| atp-dependent rna helicase hrpa | HSERO_RS17315 | Not Available | Negative | 3967282 - 3971349 | 151860.0 |
| amino-acid n-acetyltransferase | HSERO_RS17320 | Not Available | Positive | 3971534 - 3972847 | 47536.5 |
| oxidative damage protection protein | HSERO_RS17325 | Not Available | Positive | 3972942 - 3973214 | 10164.3 |
| m16 family metallopeptidase | HSERO_RS17330 | Not Available | Positive | 3973332 - 3976121 | 102874.0 |
| ribose-5-phosphate isomerase rpia | HSERO_RS17335 | Not Available | Negative | 3976351 - 3977022 | 23373.4 |
| cation:proton antiporter | HSERO_RS17340 | Not Available | Negative | 3977123 - 3978886 | 63630.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


