Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abrb/maze/spovt family dna-binding domain-containing protein | HSERO_RS17095 | Not Available | Negative | 3915700 - 3915954 | 9518.4 |
| Trna-val | Not Available | Not Available | Positive | 3916259 - 3916333 | Not Available |
| dna polymerase iii subunit epsilon | HSERO_RS17105 | Not Available | Negative | 3916481 - 3917215 | 26759.8 |
| ribonuclease hi | HSERO_RS17110 | Not Available | Negative | 3917287 - 3917718 | 15842.7 |
| class i sam-dependent methyltransferase | HSERO_RS17115 | Not Available | Negative | 3917819 - 3918613 | 29876.1 |
| hydroxyacylglutathione hydrolase | HSERO_RS17120 | Not Available | Positive | 3918676 - 3919470 | 28836.5 |
| transglycosylase slt domain-containing protein | HSERO_RS17125 | Not Available | Positive | 3919809 - 3921338 | 55952.1 |
| abc transporter atp-binding protein | HSERO_RS17130 | Not Available | Negative | 3921502 - 3923091 | 57941.2 |
| abc transporter permease | HSERO_RS17135 | Not Available | Negative | 3923088 - 3924134 | 38916.4 |
| microcin c abc transporter permease yejb | HSERO_RS17140 | Not Available | Negative | 3924131 - 3925201 | 39243.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


