Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | HSERO_RS16950 | Not Available | Negative | 3879120 - 3879782 | 24194.3 |
| tonb-dependent receptor | HSERO_RS16955 | Not Available | Positive | 3880139 - 3882355 | 78009.0 |
| fe2+-dependent dioxygenase | HSERO_RS16960 | Not Available | Positive | 3882379 - 3883065 | 25426.3 |
| multidrug transporter subunit mdtd | HSERO_RS16965 | Not Available | Negative | 3883103 - 3884536 | 50496.8 |
| abc transporter permease | HSERO_RS16970 | Not Available | Negative | 3884659 - 3885513 | 30419.9 |
| abc transporter atp-binding protein | HSERO_RS16975 | Not Available | Negative | 3885544 - 3886371 | 30603.9 |
| abc transporter substrate-binding protein | HSERO_RS16980 | Not Available | Negative | 3886514 - 3887527 | 36049.5 |
| abc transporter substrate-binding protein | HSERO_RS16985 | Not Available | Negative | 3887593 - 3888654 | 37689.8 |
| response regulator | HSERO_RS16990 | Not Available | Positive | 3888922 - 3889590 | 24955.6 |
| sensor histidine kinase | HSERO_RS16995 | Not Available | Positive | 3889591 - 3890970 | 49701.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


