Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema family protein | HSERO_RS16850 | Not Available | Positive | 3857305 - 3857898 | 21932.0 |
| tpm domain-containing protein | HSERO_RS16855 | Not Available | Positive | 3857920 - 3858771 | 29764.6 |
| tpm domain-containing protein | HSERO_RS16860 | Not Available | Positive | 3858773 - 3859306 | 19778.7 |
| hypothetical protein | HSERO_RS16865 | Not Available | Positive | 3859311 - 3859607 | 9866.54 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | HSERO_RS16870 | Not Available | Negative | 3859625 - 3861079 | 52159.1 |
| diguanylate cyclase | HSERO_RS16875 | Not Available | Positive | 3861281 - 3862495 | 45453.4 |
| hypothetical protein | HSERO_RS16880 | Not Available | Negative | 3862682 - 3862864 | 6348.37 |
| magnesium-translocating p-type atpase | HSERO_RS16885 | Not Available | Positive | 3863732 - 3866494 | 102025.0 |
| lysozyme inhibitor lpri family protein | HSERO_RS16890 | Not Available | Negative | 3866669 - 3867088 | 16023.3 |
| suppressor of fused domain protein | HSERO_RS16895 | Not Available | Negative | 3867255 - 3868439 | 43484.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


