Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4810 domain-containing protein | HSERO_RS16800 | Not Available | Positive | 3845209 - 3845580 | 13586.3 |
| duf799 domain-containing protein | HSERO_RS16805 | Not Available | Positive | 3845577 - 3846242 | 23602.4 |
| sigma-54-dependent transcriptional regulator | HSERO_RS16810 | Not Available | Negative | 3846349 - 3847686 | 48207.0 |
| atp-binding protein | HSERO_RS16815 | Not Available | Negative | 3847686 - 3849488 | 65645.3 |
| mfs family transporter | HSERO_RS16820 | Not Available | Negative | 3849595 - 3850968 | 48965.3 |
| nadp-dependent malic enzyme | HSERO_RS16825 | Not Available | Negative | 3851422 - 3853734 | 84236.4 |
| thiamine-phosphate kinase | HSERO_RS16830 | Not Available | Positive | 3854111 - 3855076 | 33851.4 |
| phosphatidylglycerophosphatase a | HSERO_RS16835 | Not Available | Positive | 3855073 - 3855615 | 20193.7 |
| cina family protein | HSERO_RS16840 | Not Available | Positive | 3855749 - 3856231 | 16440.5 |
| orotidine-5'-phosphate decarboxylase | HSERO_RS16845 | Not Available | Negative | 3856320 - 3857138 | 29462.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


