Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjgn family protein | HSERO_RS16755 | Not Available | Positive | 3836758 - 3837849 | 40103.3 |
| m48 family metallopeptidase | HSERO_RS16760 | Not Available | Positive | 3837854 - 3838843 | 36052.5 |
| hypothetical protein | HSERO_RS25060 | Not Available | Negative | 3838942 - 3839091 | 5629.57 |
| lysr family transcriptional regulator | HSERO_RS16765 | Not Available | Negative | 3839298 - 3840161 | 31577.3 |
| class a beta-lactamase | HSERO_RS16770 | Not Available | Positive | 3840276 - 3841175 | 31838.0 |
| 2-keto-4-pentenoate hydratase | HSERO_RS16775 | Not Available | Negative | 3841191 - 3841934 | 26014.2 |
| merr family transcriptional regulator | HSERO_RS16780 | Not Available | Positive | 3842108 - 3842542 | 16203.4 |
| aldo/keto reductase | HSERO_RS16785 | Not Available | Positive | 3842539 - 3843570 | 37403.6 |
| carbonic anhydrase | HSERO_RS16790 | Not Available | Negative | 3843595 - 3844233 | 23043.6 |
| csgg/hfab family protein | HSERO_RS16795 | Not Available | Positive | 3844508 - 3845176 | 23625.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


