Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ilvd/edd family dehydratase | HSERO_RS16705 | Not Available | Positive | 3823822 - 3825558 | 63161.0 |
| c-terminal binding protein | HSERO_RS16710 | Not Available | Positive | 3825847 - 3826806 | 34798.8 |
| abc transporter atp-binding protein | HSERO_RS16715 | Not Available | Positive | 3827058 - 3828143 | 39528.6 |
| abc transporter substrate-binding protein | HSERO_RS16720 | Not Available | Positive | 3828268 - 3829599 | 48182.3 |
| carbohydrate abc transporter permease | HSERO_RS16725 | Not Available | Positive | 3829770 - 3830669 | 33182.1 |
| carbohydrate abc transporter permease | HSERO_RS16730 | Not Available | Positive | 3830669 - 3831550 | 32896.7 |
| c-type cytochrome | HSERO_RS16735 | Not Available | Negative | 3831642 - 3832967 | 46820.3 |
| gmc family oxidoreductase | HSERO_RS16740 | Not Available | Negative | 3832979 - 3834760 | 65169.0 |
| gluconate 2-dehydrogenase subunit 3 family protein | HSERO_RS16745 | Not Available | Negative | 3834763 - 3835485 | 26420.4 |
| dienelactone hydrolase family protein | HSERO_RS16750 | Not Available | Negative | 3835657 - 3836424 | 27032.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


