Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| effector protein tle3 domain-containing protein | HSERO_RS01385 | Not Available | Positive | 298903 - 301038 | 79418.1 |
| hypothetical protein | HSERO_RS01390 | Not Available | Positive | 301038 - 302528 | 55849.5 |
| hypothetical protein | HSERO_RS01395 | Not Available | Positive | 302588 - 303940 | 50454.0 |
| paar domain-containing protein | HSERO_RS24225 | Not Available | Positive | 303975 - 304238 | 8790.63 |
| ggdef domain-containing protein | HSERO_RS01405 | Not Available | Negative | 304333 - 305409 | 40021.6 |
| glyoxalase/bleomycin resistance/dioxygenase family protein | HSERO_RS01410 | Not Available | Positive | 305960 - 306370 | 14524.5 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | HSERO_RS01415 | Not Available | Negative | 306446 - 306805 | 13183.0 |
| threo-3-hydroxy-l-aspartate ammonia-lyase | HSERO_RS01420 | Not Available | Negative | 306899 - 307879 | 34746.0 |
| helix-turn-helix transcriptional regulator | HSERO_RS01425 | Not Available | Negative | 307957 - 308613 | 23837.3 |
| phospholipase d-like domain-containing protein | HSERO_RS01430 | Not Available | Negative | 308723 - 309973 | 45535.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


