Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | HSERO_RS16660 | Not Available | Negative | 3813645 - 3814526 | 32538.8 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | HSERO_RS16665 | Not Available | Positive | 3814563 - 3815612 | 38230.4 |
| acetylornithine transaminase | HSERO_RS16670 | Not Available | Positive | 3816032 - 3817234 | 43651.7 |
| c40 family peptidase | HSERO_RS16675 | Not Available | Positive | 3817271 - 3817807 | 18964.6 |
| fadr/gntr family transcriptional regulator | HSERO_RS16680 | Not Available | Negative | 3817795 - 3818565 | 29037.0 |
| ldh family oxidoreductase | HSERO_RS16685 | Not Available | Negative | 3818574 - 3819635 | 37003.3 |
| tripartite tricarboxylate transporter permease | HSERO_RS16690 | Not Available | Negative | 3819687 - 3821183 | 52636.4 |
| tripartite tricarboxylate transporter tctb family protein | HSERO_RS16695 | Not Available | Negative | 3821193 - 3821723 | 19142.1 |
| tripartite tricarboxylate transporter substrate binding protein | HSERO_RS16700 | Not Available | Negative | 3821815 - 3822762 | 32537.5 |
| hypothetical protein | HSERO_RS24850 | Not Available | Positive | 3823132 - 3823692 | 19892.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


