Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr/gntr family transcriptional regulator | HSERO_RS16610 | Not Available | Negative | 3803007 - 3803726 | 26519.0 |
| lysr family transcriptional regulator | HSERO_RS16615 | Not Available | Positive | 3804255 - 3805160 | 33835.1 |
| putative hydro-lyase | HSERO_RS16620 | Not Available | Positive | 3805299 - 3806153 | 30145.1 |
| mfs transporter | HSERO_RS16625 | Not Available | Positive | 3806258 - 3807502 | 45113.2 |
| na+/h+ antiporter | HSERO_RS16630 | Not Available | Positive | 3807677 - 3809359 | 61558.1 |
| hypothetical protein | HSERO_RS16635 | Not Available | Negative | 3809456 - 3809725 | 9445.84 |
| transporter substrate-binding domain-containing protein | HSERO_RS16640 | Not Available | Negative | 3809956 - 3810747 | 28618.6 |
| abc transporter permease | HSERO_RS16645 | Not Available | Negative | 3810761 - 3811534 | 27860.3 |
| abc transporter substrate-binding protein | HSERO_RS16650 | Not Available | Negative | 3811666 - 3812667 | 35988.7 |
| abc transporter atp-binding protein | HSERO_RS16655 | Not Available | Negative | 3812664 - 3813437 | 28527.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


