Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| entericidin a/b family lipoprotein | HSERO_RS16510 | Not Available | Negative | 3779873 - 3780004 | 4464.59 |
| 3-isopropylmalate dehydratase large subunit | HSERO_RS16515 | Not Available | Negative | 3780041 - 3781441 | 50275.2 |
| m48 family metallopeptidase | HSERO_RS16520 | Not Available | Negative | 3781675 - 3782496 | 29517.6 |
| chorismate synthase | HSERO_RS16525 | Not Available | Negative | 3782646 - 3783734 | 38728.1 |
| mfs transporter | HSERO_RS16530 | Not Available | Negative | 3783824 - 3785713 | 69491.5 |
| cbs domain-containing protein | HSERO_RS16535 | Not Available | Negative | 3785869 - 3786330 | 17038.7 |
| duf962 domain-containing protein | HSERO_RS16540 | Not Available | Positive | 3786627 - 3786947 | 12403.2 |
| yihy family inner membrane protein | HSERO_RS16545 | Not Available | Negative | 3786976 - 3788388 | 51953.7 |
| nad(p)h:quinone oxidoreductase | HSERO_RS16550 | Not Available | Positive | 3788634 - 3789278 | 22290.5 |
| duf2069 domain-containing protein | HSERO_RS16555 | Not Available | Positive | 3789275 - 3789667 | 14503.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


