Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | HSERO_RS16360 | Not Available | Positive | 3745076 - 3747760 | 97991.6 |
| hypothetical protein | HSERO_RS16365 | Not Available | Positive | 3747801 - 3748727 | 34010.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | HSERO_RS16370 | Not Available | Negative | 3748889 - 3749431 | 19806.7 |
| cupin domain-containing protein | HSERO_RS16375 | Not Available | Positive | 3749656 - 3750777 | 42810.2 |
| hypothetical protein | HSERO_RS25225 | Not Available | Positive | 3751120 - 3751392 | 8212.66 |
| mbl fold metallo-hydrolase | HSERO_RS16385 | Not Available | Negative | 3751761 - 3752546 | 28221.5 |
| outer membrane protein assembly factor bamc | HSERO_RS16390 | Not Available | Negative | 3752565 - 3753746 | 43324.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | HSERO_RS16395 | Not Available | Negative | 3753808 - 3754686 | 31248.1 |
| tryptophan--trna ligase | HSERO_RS16400 | Not Available | Negative | 3754843 - 3756042 | 45031.0 |
| site-2 protease family protein | HSERO_RS16405 | Not Available | Negative | 3756085 - 3756747 | 24564.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


