Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-oxoguanine deaminase | HSERO_RS16310 | Not Available | Positive | 3729384 - 3730760 | 49757.7 |
| ncs2 family permease | HSERO_RS16315 | Not Available | Positive | 3731290 - 3732588 | 45242.1 |
| xanthine dehydrogenase small subunit | HSERO_RS16320 | Not Available | Positive | 3732887 - 3734371 | 54310.1 |
| xanthine dehydrogenase molybdopterin binding subunit | HSERO_RS16325 | Not Available | Positive | 3734415 - 3736784 | 85349.6 |
| xanthine dehydrogenase accessory protein xdhc | HSERO_RS16330 | Not Available | Positive | 3736806 - 3737894 | 39665.8 |
| guanine deaminase | HSERO_RS16335 | Not Available | Positive | 3738069 - 3739367 | 47701.4 |
| tetr/acrr family transcriptional regulator | HSERO_RS16340 | Not Available | Negative | 3739408 - 3740010 | 23126.1 |
| efflux transporter outer membrane subunit | HSERO_RS16345 | Not Available | Positive | 3740253 - 3741800 | 55089.8 |
| hlyd family efflux transporter periplasmic adaptor subunit | HSERO_RS16350 | Not Available | Positive | 3741806 - 3743041 | 43451.6 |
| dha2 family efflux mfs transporter permease subunit | HSERO_RS16355 | Not Available | Positive | 3743075 - 3744652 | 55799.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


