Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | HSERO_RS16220 | Not Available | Positive | 3698638 - 3699108 | 17091.1 |
| tetratricopeptide repeat protein | HSERO_RS16225 | Not Available | Positive | 3699120 - 3700439 | 48433.6 |
| hypothetical protein | HSERO_RS16230 | Not Available | Positive | 3700727 - 3700915 | 6695.96 |
| tonb-dependent receptor | HSERO_RS16235 | Not Available | Negative | 3701032 - 3703299 | 82254.6 |
| duf3325 domain-containing protein | HSERO_RS16240 | Not Available | Negative | 3703639 - 3704001 | 12987.4 |
| pepsy-associated tm helix domain-containing protein | HSERO_RS16245 | Not Available | Negative | 3703998 - 3705638 | 59673.3 |
| duf3649 domain-containing protein | HSERO_RS16250 | Not Available | Negative | 3705635 - 3705940 | 10624.4 |
| cobalt abc transporter substrate-binding protein | HSERO_RS16255 | Not Available | Negative | 3706005 - 3706724 | 25577.5 |
| carbonate dehydratase | HSERO_RS16260 | Not Available | Positive | 3707064 - 3707624 | 19998.8 |
| hypothetical protein | HSERO_RS24840 | Not Available | Negative | 3708006 - 3708434 | 16340.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


