Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | HSERO_RS01330 | Not Available | Positive | 284477 - 285958 | 51846.0 |
| carbohydrate abc transporter permease | HSERO_RS01335 | Not Available | Negative | 286019 - 286870 | 31527.2 |
| carbohydrate abc transporter permease | HSERO_RS01340 | Not Available | Negative | 286897 - 287832 | 34536.8 |
| abc transporter substrate-binding protein | HSERO_RS01345 | Not Available | Negative | 288006 - 289244 | 45642.5 |
| beta-galactosidase | HSERO_RS01350 | Not Available | Negative | 289392 - 291368 | 74747.5 |
| abc transporter atp-binding protein | HSERO_RS01355 | Not Available | Negative | 291464 - 292609 | 41490.2 |
| laci family dna-binding transcriptional regulator | HSERO_RS01360 | Not Available | Positive | 292958 - 293974 | 36512.1 |
| tetr family transcriptional regulator | HSERO_RS01365 | Not Available | Negative | 293971 - 294603 | 23556.5 |
| arabinose transporter | HSERO_RS01370 | Not Available | Positive | 294813 - 296030 | 41306.6 |
| type vi secretion system vgr family protein | HSERO_RS24220 | Not Available | Positive | 296150 - 298888 | 98845.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


