Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | HSERO_RS16170 | Not Available | Negative | 3689181 - 3690029 | 31079.4 |
| hded family acid-resistance protein | HSERO_RS16175 | Not Available | Negative | 3690026 - 3691477 | 53494.1 |
| ydcf family protein | HSERO_RS16180 | Not Available | Positive | 3691554 - 3692363 | 29031.7 |
| methyl-accepting chemotaxis protein | HSERO_RS16185 | Not Available | Positive | 3692592 - 3694421 | 63249.1 |
| nrsf family protein | HSERO_RS16190 | Not Available | Negative | 3694526 - 3695167 | 22901.7 |
| sigma-70 family rna polymerase sigma factor | HSERO_RS16195 | Not Available | Negative | 3695164 - 3695793 | 23309.2 |
| duf1109 domain-containing protein | HSERO_RS16200 | Not Available | Negative | 3695809 - 3696474 | 23090.0 |
| duf2282 domain-containing protein | HSERO_RS16205 | Not Available | Positive | 3696723 - 3697001 | 9423.41 |
| duf692 domain-containing protein | HSERO_RS16210 | Not Available | Positive | 3697022 - 3697873 | 30944.9 |
| dna-binding domain-containing protein | HSERO_RS16215 | Not Available | Positive | 3697870 - 3698625 | 27570.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


