Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HSERO_RS16080 | Not Available | Positive | 3671480 - 3672160 | 23902.1 |
| aromatic amino acid dmt transporter yddg | HSERO_RS16085 | Not Available | Negative | 3672148 - 3673071 | 32267.2 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | HSERO_RS16090 | Not Available | Positive | 3673229 - 3673885 | 24496.2 |
| mfs transporter | HSERO_RS16095 | Not Available | Positive | 3673988 - 3675145 | 40073.2 |
| acetylornithine deacetylase | HSERO_RS16100 | Not Available | Negative | 3675217 - 3676419 | 43693.3 |
| response regulator | HSERO_RS16105 | Not Available | Positive | 3676809 - 3677273 | 17312.9 |
| hypothetical protein | HSERO_RS16110 | Not Available | Negative | 3677340 - 3677621 | 11149.9 |
| ggdef domain-containing protein | HSERO_RS24185 | Not Available | Positive | 3677886 - 3678896 | 36852.2 |
| fibro-slime domain-containing protein | HSERO_RS16120 | Not Available | Positive | 3679073 - 3679864 | 28150.6 |
| hypothetical protein | HSERO_RS16125 | Not Available | Positive | 3680445 - 3681404 | 36932.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


