Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fixh family protein | HSERO_RS16030 | Not Available | Negative | 3660600 - 3661172 | 21163.2 |
| cytochrome c oxidase accessory protein ccog | HSERO_RS16035 | Not Available | Negative | 3661203 - 3662675 | 55545.6 |
| cytochrome-c oxidase, cbb3-type subunit iii | HSERO_RS16040 | Not Available | Negative | 3662818 - 3663750 | 33838.3 |
| cbb3-type cytochrome oxidase subunit 3 | HSERO_RS16045 | Not Available | Negative | 3663743 - 3663937 | 7204.71 |
| cytochrome-c oxidase, cbb3-type subunit ii | HSERO_RS16050 | Not Available | Negative | 3663942 - 3664556 | 23235.8 |
| cytochrome-c oxidase, cbb3-type subunit i | HSERO_RS16055 | Not Available | Negative | 3664570 - 3665997 | 53439.3 |
| cbb3-type cytochrome oxidase assembly protein ccos | HSERO_RS16060 | Not Available | Negative | 3666142 - 3666315 | 6221.44 |
| heavy metal translocating p-type atpase | HSERO_RS16065 | Not Available | Negative | 3666315 - 3668834 | 88542.2 |
| sulfite exporter taue/safe family protein | HSERO_RS16070 | Not Available | Negative | 3668837 - 3669691 | 29196.9 |
| oxygen-independent coproporphyrinogen iii oxidase | HSERO_RS16075 | Not Available | Negative | 3669704 - 3671155 | 54933.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


