Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20 family metallopeptidase | HSERO_RS15930 | Not Available | Negative | 3635418 - 3636839 | 51600.1 |
| atp-binding cassette domain-containing protein | HSERO_RS15935 | Not Available | Negative | 3636872 - 3637714 | 30455.1 |
| abc transporter atp-binding protein | HSERO_RS15940 | Not Available | Negative | 3637711 - 3638715 | 36542.9 |
| abc transporter permease | HSERO_RS15945 | Not Available | Negative | 3638737 - 3639654 | 32403.8 |
| abc transporter permease | HSERO_RS15950 | Not Available | Negative | 3639672 - 3640589 | 33291.7 |
| abc transporter substrate-binding protein | HSERO_RS15955 | Not Available | Negative | 3640716 - 3642254 | 56776.1 |
| lysr family transcriptional regulator | HSERO_RS15960 | Not Available | Positive | 3642550 - 3643461 | 33792.3 |
| biotin/lipoyl-binding protein | HSERO_RS15965 | Not Available | Negative | 3643611 - 3644447 | 30231.6 |
| s8 family serine peptidase | HSERO_RS15970 | Not Available | Negative | 3644603 - 3648718 | 138612.0 |
| efflux transporter outer membrane subunit | HSERO_RS15975 | Not Available | Negative | 3649081 - 3650556 | 51765.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


