Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic amino acid transaminase | HSERO_RS15835 | Not Available | Negative | 3614418 - 3615635 | 43855.6 |
| excinuclease abc subunit uvrb | HSERO_RS15840 | Not Available | Positive | 3616058 - 3618139 | 78817.4 |
| uracil-dna glycosylase | HSERO_RS15845 | Not Available | Positive | 3618226 - 3619026 | 28514.3 |
| methyl-accepting chemotaxis protein | HSERO_RS15850 | Not Available | Negative | 3619040 - 3621094 | 71035.8 |
| hypothetical protein | HSERO_RS15855 | Not Available | Negative | 3621558 - 3621812 | 9470.29 |
| lysr substrate-binding domain-containing protein | HSERO_RS15860 | Not Available | Positive | 3621916 - 3622854 | 34940.1 |
| putative quinol monooxygenase | HSERO_RS15865 | Not Available | Negative | 3623092 - 3623409 | 11581.0 |
| metal abc transporter substrate-binding protein | HSERO_RS15870 | Not Available | Negative | 3623486 - 3624424 | 33965.5 |
| metal abc transporter permease | HSERO_RS15875 | Not Available | Negative | 3624454 - 3625341 | 30910.8 |
| metal abc transporter atp-binding protein | HSERO_RS15880 | Not Available | Negative | 3625338 - 3626180 | 30498.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


