Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-4-deoxyglucarate dehydratase | HSERO_RS15785 | Not Available | Positive | 3602717 - 3603637 | 33176.9 |
| methyl-accepting chemotaxis protein | HSERO_RS15790 | Not Available | Negative | 3603814 - 3605604 | 63028.7 |
| lactonase family protein | HSERO_RS15795 | Not Available | Negative | 3605896 - 3606993 | 38709.6 |
| galactarate dehydratase | HSERO_RS15800 | Not Available | Negative | 3607098 - 3608666 | 56044.3 |
| mfs transporter | HSERO_RS15805 | Not Available | Negative | 3608742 - 3610085 | 48567.5 |
| permease | HSERO_RS15810 | Not Available | Positive | 3610477 - 3611541 | 37567.1 |
| trna 2-selenouridine(34) synthase mnmh | HSERO_RS15815 | Not Available | Negative | 3611548 - 3612639 | 40927.2 |
| selenide, water dikinase seld | HSERO_RS15820 | Not Available | Negative | 3612639 - 3613685 | 36428.9 |
| Trna-asn | Not Available | Not Available | Positive | 3613958 - 3614033 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 3614214 - 3614289 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


