Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | HSERO_RS01280 | Not Available | Positive | 270447 - 272240 | 62291.2 |
| ggdef domain-containing protein | HSERO_RS01285 | Not Available | Negative | 272282 - 273436 | 41012.8 |
| hypothetical protein | HSERO_RS01290 | Not Available | Negative | 273539 - 273724 | 6747.83 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | HSERO_RS01295 | Not Available | Positive | 273932 - 275932 | 72202.5 |
| bifunctional enoyl-coa hydratase/phosphate acetyltransferase | HSERO_RS01300 | Not Available | Positive | 276107 - 277066 | 33250.6 |
| acetate/propionate family kinase | HSERO_RS01305 | Not Available | Positive | 277063 - 278256 | 42291.7 |
| alpha/beta fold hydrolase | HSERO_RS01310 | Not Available | Positive | 278253 - 279383 | 41622.3 |
| tetr/acrr family transcriptional regulator | HSERO_RS01315 | Not Available | Negative | 279396 - 280061 | 24851.7 |
| efflux rnd transporter periplasmic adaptor subunit | HSERO_RS01320 | Not Available | Positive | 280207 - 281337 | 39513.1 |
| efflux rnd transporter permease subunit | HSERO_RS01325 | Not Available | Positive | 281334 - 284477 | 114841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


