Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sirohydrochlorin chelatase | HSERO_RS15585 | Not Available | Negative | 3560679 - 3561044 | 12988.8 |
| lps export abc transporter permease lptg | HSERO_RS15590 | Not Available | Negative | 3561075 - 3562205 | 41819.3 |
| lps export abc transporter permease lptf | HSERO_RS15595 | Not Available | Negative | 3562207 - 3563337 | 41675.1 |
| leucyl aminopeptidase | HSERO_RS15600 | Not Available | Positive | 3563489 - 3565009 | 52829.1 |
| dienelactone hydrolase family protein | HSERO_RS15605 | Not Available | Positive | 3565225 - 3566046 | 29185.7 |
| alkene reductase | HSERO_RS15610 | Not Available | Positive | 3566260 - 3567360 | 39566.1 |
| mipa/ompv family protein | HSERO_RS15615 | Not Available | Positive | 3567484 - 3568245 | 27913.1 |
| fxdxf family pep-cterm protein | HSERO_RS15620 | Not Available | Positive | 3568644 - 3569210 | 18947.5 |
| fxdxf family pep-cterm protein | HSERO_RS15625 | Not Available | Positive | 3569677 - 3570249 | 19599.3 |
| exodeoxyribonuclease iii | HSERO_RS15630 | Not Available | Positive | 3570420 - 3571187 | 29315.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


