Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | HSERO_RS15485 | Not Available | Positive | 3540961 - 3542010 | 38100.1 |
| abc transporter substrate-binding protein | HSERO_RS15490 | Not Available | Positive | 3542072 - 3543364 | 47004.1 |
| carbohydrate abc transporter permease | HSERO_RS15495 | Not Available | Positive | 3543390 - 3544265 | 32600.6 |
| carbohydrate abc transporter permease | HSERO_RS15500 | Not Available | Positive | 3544262 - 3545092 | 31023.4 |
| outer membrane protein assembly factor bame domain-containing protein | HSERO_RS15505 | Not Available | Negative | 3545106 - 3545633 | 20110.9 |
| duf3460 family protein | HSERO_RS15510 | Not Available | Positive | 3545715 - 3545918 | 7813.28 |
| segregation and condensation protein a | HSERO_RS15515 | Not Available | Positive | 3545928 - 3546824 | 33566.4 |
| pantoate--beta-alanine ligase | HSERO_RS15520 | Not Available | Positive | 3546907 - 3547746 | 31303.7 |
| porin family protein | HSERO_RS15525 | Not Available | Negative | 3547861 - 3548469 | 21967.2 |
| protein phosphatase chez | HSERO_RS15530 | Not Available | Positive | 3549294 - 3550034 | 26571.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


