Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-erythronate dehydrogenase | HSERO_RS15385 | Not Available | Positive | 3521230 - 3522204 | 34912.3 |
| 3-hydroxyisobutyrate dehydrogenase | HSERO_RS15390 | Not Available | Negative | 3522282 - 3523175 | 30482.2 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | HSERO_RS15395 | Not Available | Negative | 3523186 - 3524692 | 54115.0 |
| abc transporter substrate-binding protein | HSERO_RS15400 | Not Available | Negative | 3524768 - 3526000 | 44011.7 |
| lysr family transcriptional regulator | HSERO_RS15405 | Not Available | Positive | 3526205 - 3527122 | 34681.4 |
| dj-1/pfpi family protein | HSERO_RS15410 | Not Available | Positive | 3527214 - 3527795 | 20335.5 |
| methyl-accepting chemotaxis protein | HSERO_RS15415 | Not Available | Positive | 3528320 - 3529963 | 58016.2 |
| rna polymerase sigma factor | HSERO_RS15420 | Not Available | Positive | 3530080 - 3530667 | 22111.2 |
| hypothetical protein | HSERO_RS15425 | Not Available | Positive | 3530667 - 3531068 | 15490.2 |
| fad-dependent oxidoreductase | HSERO_RS15430 | Not Available | Negative | 3531097 - 3532350 | 45095.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


