Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome oxidase putative small subunit cydp | HSERO_RS15335 | Not Available | Positive | 3512851 - 3513105 | 9564.0 |
| cytochrome ubiquinol oxidase subunit i | HSERO_RS15340 | Not Available | Positive | 3513112 - 3514737 | 59853.2 |
| cytochrome d ubiquinol oxidase subunit ii | HSERO_RS15345 | Not Available | Positive | 3514765 - 3515904 | 41531.3 |
| cytochrome bd-i oxidase subunit cydx | HSERO_RS24440 | Not Available | Positive | 3515941 - 3516111 | 6388.73 |
| duf2867 domain-containing protein | HSERO_RS15355 | Not Available | Positive | 3516176 - 3516712 | 19306.6 |
| organic hydroperoxide resistance protein | HSERO_RS15360 | Not Available | Negative | 3516793 - 3517227 | 14559.3 |
| marr family winged helix-turn-helix transcriptional regulator | HSERO_RS15365 | Not Available | Negative | 3517434 - 3517919 | 18228.6 |
| elongation factor p maturation arginine rhamnosyltransferase earp | HSERO_RS15370 | Not Available | Positive | 3518054 - 3519223 | 43526.7 |
| elongation factor p | HSERO_RS15375 | Not Available | Positive | 3519361 - 3519936 | 21630.9 |
| fadr/gntr family transcriptional regulator | HSERO_RS15380 | Not Available | Negative | 3520255 - 3521091 | 29608.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


