Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | HSERO_RS15285 | Not Available | Negative | 3499582 - 3501678 | 75281.7 |
| tolc family protein | HSERO_RS15290 | Not Available | Negative | 3502628 - 3503890 | 46277.8 |
| tetratricopeptide repeat protein | HSERO_RS15295 | Not Available | Negative | 3504278 - 3505990 | 63236.4 |
| peptide-methionine (s)-s-oxide reductase msra | HSERO_RS15300 | Not Available | Negative | 3506060 - 3506749 | 24481.2 |
| sulfite oxidase heme-binding subunit yedz | HSERO_RS15305 | Not Available | Negative | 3506790 - 3507428 | 24189.8 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | HSERO_RS15310 | Not Available | Negative | 3507441 - 3508409 | 36191.6 |
| heavy metal response regulator transcription factor | HSERO_RS15315 | Not Available | Positive | 3508607 - 3509278 | 25400.9 |
| heavy metal sensor histidine kinase | HSERO_RS15320 | Not Available | Positive | 3509275 - 3510702 | 52238.9 |
| ai-2e family transporter | HSERO_RS15325 | Not Available | Negative | 3510662 - 3511786 | 40541.6 |
| gbsr/marr family transcriptional regulator | HSERO_RS15330 | Not Available | Positive | 3512279 - 3512848 | 22189.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


