Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase d-like domain-containing protein | HSERO_RS01230 | Not Available | Negative | 255099 - 257030 | 73240.6 |
| type vi secretion system vgr family protein | HSERO_RS01235 | Not Available | Negative | 257057 - 259957 | 106226.0 |
| rna-binding s4 domain-containing protein | HSERO_RS01240 | Not Available | Positive | 260128 - 260502 | 14109.6 |
| hypothetical protein | HSERO_RS01245 | Not Available | Positive | 260596 - 261060 | 17044.9 |
| tetr/acrr family transcriptional regulator | HSERO_RS01250 | Not Available | Positive | 261271 - 261972 | 25991.4 |
| acyl-coa dehydrogenase c-terminal domain-containing protein | HSERO_RS01255 | Not Available | Positive | 261991 - 263781 | 65416.5 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | HSERO_RS01260 | Not Available | Positive | 264005 - 266392 | 86247.1 |
| acetyl-coa c-acyltransferase | HSERO_RS01265 | Not Available | Positive | 266442 - 267638 | 41605.5 |
| enoyl-coa hydratase | HSERO_RS01270 | Not Available | Positive | 267743 - 268507 | 27766.5 |
| nad(p)/fad-dependent oxidoreductase | HSERO_RS01275 | Not Available | Positive | 269038 - 270312 | 46555.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


