Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | HSERO_RS15185 | Not Available | Positive | 3446690 - 3447454 | 27081.7 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | HSERO_RS15190 | Not Available | Positive | 3447451 - 3447954 | 17683.4 |
| cold-shock protein | HSERO_RS15195 | Not Available | Positive | 3448267 - 3448473 | 7279.49 |
| malate synthase a | HSERO_RS15200 | Not Available | Negative | 3448631 - 3450217 | 59142.0 |
| lysr family transcriptional regulator | HSERO_RS15205 | Not Available | Positive | 3450469 - 3451377 | 33002.7 |
| serine hydrolase domain-containing protein | HSERO_RS15210 | Not Available | Negative | 3451387 - 3452634 | 45030.7 |
| methyl-accepting chemotaxis protein | HSERO_RS15215 | Not Available | Negative | 3452634 - 3454244 | 57564.9 |
| plp-dependent aminotransferase family protein | HSERO_RS15220 | Not Available | Negative | 3454460 - 3455869 | 52439.3 |
| hydroxymethylglutaryl-coa reductase, degradative | HSERO_RS15225 | Not Available | Positive | 3455969 - 3457339 | 48591.8 |
| abc transporter substrate-binding protein | HSERO_RS15230 | Not Available | Positive | 3457416 - 3458630 | 43410.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


