Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | HSERO_RS15095 | Not Available | Negative | 3425044 - 3426144 | 40236.5 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | HSERO_RS15100 | Not Available | Negative | 3426439 - 3427216 | 28511.7 |
| hypothetical protein | HSERO_RS15105 | Not Available | Positive | 3427637 - 3427921 | 10395.5 |
| putative toxin-antitoxin system toxin component, pin family | HSERO_RS15110 | Not Available | Positive | 3427940 - 3428455 | 18930.0 |
| pyridoxal phosphate-dependent aminotransferase | HSERO_RS15115 | Not Available | Positive | 3428519 - 3429676 | 42020.7 |
| glutathione binding-like protein | HSERO_RS15120 | Not Available | Positive | 3429759 - 3430451 | 26108.2 |
| sensor domain-containing diguanylate cyclase | HSERO_RS15125 | Not Available | Negative | 3430485 - 3432320 | 68288.1 |
| maoc family dehydratase | HSERO_RS15130 | Not Available | Negative | 3432528 - 3432983 | 16627.3 |
| diguanylate cyclase | HSERO_RS15135 | Not Available | Negative | 3433021 - 3434046 | 38063.5 |
| chemotaxis response regulator protein-glutamate methylesterase | HSERO_RS15140 | Not Available | Negative | 3434058 - 3435086 | 35739.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


