Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-lyase | HSERO_RS14995 | Not Available | Negative | 3405203 - 3406381 | 43420.3 |
| hypothetical protein | HSERO_RS15000 | Not Available | Negative | 3406500 - 3406931 | 14911.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | HSERO_RS15005 | Not Available | Negative | 3406931 - 3408307 | 50446.8 |
| avrd family protein | HSERO_RS15010 | Not Available | Negative | 3408527 - 3409393 | 32426.1 |
| aaa family atpase | HSERO_RS15015 | Not Available | Negative | 3409420 - 3410097 | 25248.6 |
| fmn-dependent nadh-azoreductase | HSERO_RS15020 | Not Available | Negative | 3410113 - 3410739 | 23152.5 |
| lysr family transcriptional regulator | HSERO_RS15025 | Not Available | Positive | 3410842 - 3411702 | 32206.1 |
| polyhydroxyalkanoate synthesis repressor phar | HSERO_RS15030 | Not Available | Negative | 3411979 - 3412545 | 21473.8 |
| 3-ketoacyl-acp reductase | HSERO_RS15035 | Not Available | Negative | 3412873 - 3413613 | 26305.4 |
| pha/phb synthase family protein | HSERO_RS15040 | Not Available | Negative | 3413862 - 3415685 | 66828.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


