Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine--trna ligase | HSERO_RS14795 | Not Available | Negative | 3358687 - 3360042 | 50478.9 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | HSERO_RS14800 | Not Available | Negative | 3360181 - 3361443 | 44909.2 |
| helix-turn-helix domain-containing protein | HSERO_RS14805 | Not Available | Negative | 3361459 - 3362541 | 36401.8 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | HSERO_RS14810 | Not Available | Negative | 3362842 - 3364014 | 43401.6 |
| nucleoside-diphosphate kinase | HSERO_RS14815 | Not Available | Negative | 3364111 - 3364536 | 15495.6 |
| bax inhibitor-1/ycca family protein | HSERO_RS14820 | Not Available | Positive | 3364812 - 3365501 | 24675.7 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | HSERO_RS14825 | Not Available | Negative | 3365577 - 3366938 | 50495.4 |
| rna polymerase sigma factor rpos | HSERO_RS14830 | Not Available | Negative | 3367106 - 3368119 | 38144.1 |
| peptidoglycan dd-metalloendopeptidase family protein | HSERO_RS14835 | Not Available | Negative | 3368123 - 3369121 | 33832.1 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | HSERO_RS14840 | Not Available | Negative | 3369349 - 3370314 | 34248.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


